CE is always working with a master unit. This means that you would configure one unit the way you want it to, then use WDM to pull the config (right click on the device and select “get device config”) and finally push it back to all other units.
You can take a look at the settings.reg file in the ftprootrapportyour_script_name to find the corresponding registry key for your two settings. If you find them you can write your own WDM script to just push these two settings.
CG